BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B09LP1|AL427269
(538 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1544 877 0.0
>3x_Contig1544
Length = 10626
Score = 877 bits (439), Expect = 0.0
Identities = 468/477 (98%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 1 aagaccacatctaattattcgatctatgatgtyagcctttatgatatatacatctatggg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9436 aagaccacatctaattattcgatctatgatgtcagcctttatgatatatacatctatggg 9377
Query: 61 ttcgaatatgccgaatactttgataatttgaacctatctcattccctttgtgccattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9376 ttcgaatatgccgaatactttgataatttgaacctatctcattccctttgtgccattcag 9317
Query: 121 aatgggcctkatctaatttcatcggctaatggctcattgaacggaactaataatggtaat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9316 aatgggccttatctaatttcatcggctaatggctcattgaacggaactaataatggtaat 9257
Query: 181 acagcagaaaatgcatctctatcttctacaactctatcagttcataaatctattacggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9256 acagcagaaaatgcatctctatcttctacaactctatcagttcataaatctattacggta 9197
Query: 241 cgcgggggtagcgctaaggaacaattccatataactggcttaaattcgtcaaccacgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9196 cgcgggggtagcgctaaggaacaattccatataactggcttaaattcgtcaaccacgtac 9137
Query: 301 gtggcatatgtcacaaagaaattagccaccagcacaaaggaattggaagattctggtggt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9136 gttgcatatgtcacaaagaaattagccaccagcacaaaggaattggaagattctggtggt 9077
Query: 361 gcttctattttctaagcaattatttgagaccatgcgatgattcatcttgttcactmatct 420
| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 9076 g-ttctattttctaagcaattatttgagaccatg-gatgattcatcttgttcactcatct 9019
Query: 421 ttggattgggattttgtgatggtgttgcatattcggtaccatcmtmgctctttactg 477
||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 9018 ttggattgggattttgtgatggtgttgcatattcggtaccatcctcg-tctttactg 8963
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3403
Number of Sequences: 1807
Number of extensions: 3403
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 538
length of database: 10,358,551
effective HSP length: 16
effective length of query: 522
effective length of database: 10,329,639
effective search space: 5392071558
effective search space used: 5392071558
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)